BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F03LP1|AL424991
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 1777 0.0
>3x_Contig1493
Length = 12243
Score = 1777 bits (886), Expect = 0.0
Identities = 921/943 (97%)
Strand = Plus / Plus
Query: 18 gaaaggatcttggtttttgtatttcgatcttktaaattagataaatagagaaaatcaatg 77
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4940 gaaacgatcttggtttttgtatttcgatcttgtaaattagataaatagagaaaatcaatg 4999
Query: 78 ttgtcactttcgaagcgaaaaagtgaaagcagaaaaggatgccaatagcaaaggatacag 137
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5000 ttgtcactttcgaagcgaaaaagtgaaagcagaaaaggatgcaaatagcaaaggatacag 5059
Query: 138 agagactatatggtttgataaccgcattaggagactcaattaaccaaagggtatttaaaa 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5060 agagactatatggtttgataaccgcattaggagactcaattaaccaaagggtatttaaaa 5119
Query: 198 caaagttgacagtttaaatagggagagattaaccyaataatagaaacattttagtcacgt 257
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5120 caaagttgacagtttaaatagggagagattaacctaataatagaaacattttagtcacgt 5179
Query: 258 gactcaaatataggaatgaagaaagaatctcccccmctgccccccctcaatcattaactt 317
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5180 gacttaaatataggaatgaagaaagaatctcccccactgccccccctcaatcattaactt 5239
Query: 318 taatagagcattatataattgcmtgaattagtggctttcaagacagtcacgagcgcgccg 377
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5240 taatagagcattatataattgcatgaattagtggctttcaagacagtcacgagcgcgccg 5299
Query: 378 cyacactgcctcaatctctttgaacttgttgtatcaatatactcttaatacctgcytcta 437
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5300 ctacactgcctcaatctctttgaacttgttgtatcaatatactcttaatacctgcttcta 5359
Query: 438 atattaatgaagcatggacaactttcaaaaggtaaagtatcaatatgagccataaacttt 497
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5360 atattaatgaagcatggacaactttcaaaaggtaaagtatcaatatgagcaataaacttt 5419
Query: 498 aacagaacataaatmatgcgacttgaacyatatagaatcagatacgcatacggtaagcyg 557
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 5420 aacagaacataaataatgcgacttgaactatatagaatcagatacgcatacggtaagctg 5479
Query: 558 gctacacttgcctcggacgaagccttggaatttgtgctttacaatgcyagamaagatgtt 617
||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 5480 gctacacttgcctcggacgaagccttggaatttgtgcttaacaatgctagaaaagatgtt 5539
Query: 618 ccacaaaatgagagcncatgaccgaatttcacttttgtccaaacttgtcgtttttgtggt 677
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5540 ccacaaaatgagagcacatgaccgaatttcacttttgtccaaacttgtcgtttttgtggt 5599
Query: 678 cagcggctaatttgacttactgatgcwacaggccgcgaggaaaaagaaaatgacattacc 737
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5600 cagcggctaatttgacttactgatgctacaggccgcgaggaaaaagaaaatgacattacc 5659
Query: 738 cggaaaaataatgcgggagagaagaattgcggattttagtgcacggatccgtggttagtt 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 cggaaaaataatgcgggagagaagaattgcggattttagtgcacggatccgtggttagtt 5719
Query: 798 cacgtgacagatgtrggcacccatggcaactcgccaactcgattggcaacgattggcttc 857
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5720 cacgtgacagatgtcggcacccatggcaactcgccaactcgattggcaacgattggcttc 5779
Query: 858 cggccggtcgaaggcvggaaaaaagaaccaactacgggtctgtttcmaatcmaatcttca 917
||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 5780 cggccggtcgaaggccggaaaaaagaaccaactacgggtctgtttccaatccaatcttca 5839
Query: 918 acattgggtgcatattgctttgagcgagaatatccgattgggt 960
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5840 acattgggtgcatattgctttgagcgagaatatccgattgggt 5882
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6473
Number of Sequences: 1807
Number of extensions: 6473
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)